Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.99□□□□□ -0.49
BdnfP21237 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.99□□□□□ -0.49
BdnfP21237 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
BdnfP21237 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
BdnfP21237 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
BdnfP21237 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.99□□□□□ -0.49
BdnfP21237 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Gm44745-201ENSMUST00000206563 2723 ntBASIC11.98□□□□□ -0.49
BdnfP21237 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.98□□□□□ -0.49
BdnfP21237 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Gm43221-201ENSMUST00000197612 2071 ntBASIC11.98□□□□□ -0.49
BdnfP21237 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
BdnfP21237 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.98□□□□□ -0.49
BdnfP21237 Gm11803-201ENSMUST00000119966 444 ntBASIC11.98□□□□□ -0.49
BdnfP21237 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.98□□□□□ -0.49
BdnfP21237 Gm14760-201ENSMUST00000121831 999 ntBASIC11.98□□□□□ -0.49
BdnfP21237 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Gm8810-201ENSMUST00000172895 754 ntBASIC11.98□□□□□ -0.49
BdnfP21237 Gm27390-201ENSMUST00000184516 176 ntBASIC11.98□□□□□ -0.49
BdnfP21237 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.98□□□□□ -0.49
BdnfP21237 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.98□□□□□ -0.49
BdnfP21237 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.98□□□□□ -0.49
BdnfP21237 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.98□□□□□ -0.49
BdnfP21237 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.98□□□□□ -0.49
BdnfP21237 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
BdnfP21237 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
BdnfP21237 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
BdnfP21237 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.98□□□□□ -0.49
BdnfP21237 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.97□□□□□ -0.49
BdnfP21237 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.97□□□□□ -0.49
BdnfP21237 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.97□□□□□ -0.49
BdnfP21237 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Gm13369-201ENSMUST00000119442 987 ntBASIC11.97□□□□□ -0.49
BdnfP21237 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
BdnfP21237 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.97□□□□□ -0.49
BdnfP21237 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.97□□□□□ -0.49
BdnfP21237 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.97□□□□□ -0.49
BdnfP21237 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
BdnfP21237 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
BdnfP21237 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms