Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Cdx1P18111 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cdx1P18111 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.12□□□□□ -0.79
Cdx1P18111 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cdx1P18111 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cdx1P18111 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cdx1P18111 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cdx1P18111 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Cdx1P18111 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cdx1P18111 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Cdx1P18111 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.11□□□□□ -0.79
Cdx1P18111 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Cdx1P18111 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.11□□□□□ -0.79
Cdx1P18111 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.11□□□□□ -0.79
Cdx1P18111 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Cdx1P18111 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.11□□□□□ -0.79
Cdx1P18111 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.11□□□□□ -0.79
Cdx1P18111 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC10.11□□□□□ -0.79
Cdx1P18111 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.11□□□□□ -0.79
Cdx1P18111 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Mir7085-201ENSMUST00000184353 66 ntBASIC10.11□□□□□ -0.79
Cdx1P18111 Gm44608-201ENSMUST00000206827 855 ntBASIC10.11□□□□□ -0.79
Cdx1P18111 Gm5035-201ENSMUST00000215581 927 ntBASIC10.11□□□□□ -0.79
Cdx1P18111 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.11□□□□□ -0.79
Cdx1P18111 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.11□□□□□ -0.79
Cdx1P18111 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Cdx1P18111 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Cdx1P18111 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx1P18111 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.11□□□□□ -0.79
Cdx1P18111 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.11□□□□□ -0.79
Cdx1P18111 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Cdx1P18111 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.11□□□□□ -0.79
Cdx1P18111 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx1P18111 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.1□□□□□ -0.79
Cdx1P18111 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx1P18111 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx1P18111 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx1P18111 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx1P18111 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Cdx1P18111 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx1P18111 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx1P18111 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.1□□□□□ -0.79
Cdx1P18111 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx1P18111 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx1P18111 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.1□□□□□ -0.79
Cdx1P18111 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx1P18111 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx1P18111 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Cdx1P18111 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx1P18111 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Cdx1P18111 Gm4984-201ENSMUST00000115987 360 ntBASIC10.1□□□□□ -0.79
Cdx1P18111 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.1□□□□□ -0.79
Cdx1P18111 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Cdx1P18111 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.1□□□□□ -0.79
Cdx1P18111 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.1□□□□□ -0.79
Cdx1P18111 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Cdx1P18111 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.1□□□□□ -0.79
Cdx1P18111 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.1□□□□□ -0.79
Cdx1P18111 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.1□□□□□ -0.79
Cdx1P18111 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Cdx1P18111 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Cdx1P18111 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.1□□□□□ -0.79
Cdx1P18111 Ighv8-14-201ENSMUST00000196781 358 ntBASIC10.1□□□□□ -0.79
Cdx1P18111 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.1□□□□□ -0.79
Cdx1P18111 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.1□□□□□ -0.79
Cdx1P18111 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.1□□□□□ -0.79
Cdx1P18111 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.1□□□□□ -0.79
Cdx1P18111 Gm9899-201ENSMUST00000065519 555 ntBASIC10.1□□□□□ -0.79
Cdx1P18111 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Cdx1P18111 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Cdx1P18111 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx1P18111 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx1P18111 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx1P18111 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms