Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msx1P13297 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msx1P13297 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msx1P13297 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msx1P13297 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12□□□□□ -0.49
Msx1P13297 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Msx1P13297 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Msx1P13297 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12□□□□□ -0.49
Msx1P13297 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12□□□□□ -0.49
Msx1P13297 Gm13461-201ENSMUST00000120980 662 ntBASIC12□□□□□ -0.49
Msx1P13297 Gm12363-201ENSMUST00000122250 668 ntBASIC12□□□□□ -0.49
Msx1P13297 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12□□□□□ -0.49
Msx1P13297 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC12□□□□□ -0.49
Msx1P13297 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Msx1P13297 Gm28693-202ENSMUST00000190758 331 ntBASIC12□□□□□ -0.49
Msx1P13297 Gm28766-201ENSMUST00000191086 234 ntBASIC12□□□□□ -0.49
Msx1P13297 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12□□□□□ -0.49
Msx1P13297 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12□□□□□ -0.49
Msx1P13297 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12□□□□□ -0.49
Msx1P13297 Gm18212-201ENSMUST00000211678 889 ntBASIC12□□□□□ -0.49
Msx1P13297 Gm19208-201ENSMUST00000213861 912 ntBASIC12□□□□□ -0.49
Msx1P13297 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12□□□□□ -0.49
Msx1P13297 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12□□□□□ -0.49
Msx1P13297 CT030194.1-201ENSMUST00000225507 532 ntBASIC12□□□□□ -0.49
Msx1P13297 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12□□□□□ -0.49
Msx1P13297 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC12□□□□□ -0.49
Msx1P13297 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC12□□□□□ -0.49
Msx1P13297 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12□□□□□ -0.49
Msx1P13297 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Msx1P13297 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12□□□□□ -0.49
Msx1P13297 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Msx1P13297 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Msx1P13297 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Msx1P13297 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Msx1P13297 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Msx1P13297 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Msx1P13297 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Msx1P13297 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC11.99□□□□□ -0.49
Msx1P13297 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.99□□□□□ -0.49
Msx1P13297 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Msx1P13297 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.99□□□□□ -0.49
Msx1P13297 Gm2260-201ENSMUST00000184965 657 ntBASIC11.99□□□□□ -0.49
Msx1P13297 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.99□□□□□ -0.49
Msx1P13297 Gm42997-202ENSMUST00000200321 985 ntBASIC11.99□□□□□ -0.49
Msx1P13297 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Gm45186-201ENSMUST00000206874 478 ntBASIC11.99□□□□□ -0.49
Msx1P13297 AC154595.1-201ENSMUST00000225533 1059 ntBASIC11.99□□□□□ -0.49
Msx1P13297 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Msx1P13297 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Msx1P13297 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Msx1P13297 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.99□□□□□ -0.49
Msx1P13297 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Msx1P13297 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Msx1P13297 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msx1P13297 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.99□□□□□ -0.49
Msx1P13297 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.99□□□□□ -0.49
Msx1P13297 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms