Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.98□□□□□ -0.65
Ccl3P10855 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Ccl3P10855 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Ccl3P10855 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Ccl3P10855 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Ccl3P10855 Gm13888-201ENSMUST00000119148 422 ntBASIC10.98□□□□□ -0.65
Ccl3P10855 Gm12029-201ENSMUST00000120073 832 ntBASIC10.98□□□□□ -0.65
Ccl3P10855 Gm8566-201ENSMUST00000120174 465 ntBASIC10.98□□□□□ -0.65
Ccl3P10855 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.98□□□□□ -0.65
Ccl3P10855 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.98□□□□□ -0.65
Ccl3P10855 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Ccl3P10855 Gm17391-201ENSMUST00000171036 126 ntBASIC10.98□□□□□ -0.65
Ccl3P10855 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.98□□□□□ -0.65
Ccl3P10855 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
Ccl3P10855 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Ccl3P10855 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Mir6546-201ENSMUST00000184460 62 ntBASIC10.98□□□□□ -0.65
Ccl3P10855 Gm3332-201ENSMUST00000189337 928 ntBASIC10.98□□□□□ -0.65
Ccl3P10855 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ccl3P10855 Gm6905-201ENSMUST00000205729 511 ntBASIC10.98□□□□□ -0.65
Ccl3P10855 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC10.98□□□□□ -0.65
Ccl3P10855 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.98□□□□□ -0.65
Ccl3P10855 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.98□□□□□ -0.65
Ccl3P10855 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Ccl3P10855 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.98□□□□□ -0.65
Ccl3P10855 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.98□□□□□ -0.65
Ccl3P10855 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.98□□□□□ -0.65
Ccl3P10855 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Ccl3P10855 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ccl3P10855 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ccl3P10855 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Gm24891-201ENSMUST00000104391 136 ntBASIC10.97□□□□□ -0.65
Ccl3P10855 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Ccl3P10855 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.97□□□□□ -0.65
Ccl3P10855 Gm23085-201ENSMUST00000157849 293 ntBASIC10.97□□□□□ -0.65
Ccl3P10855 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Ccl3P10855 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Ccl3P10855 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Ccl3P10855 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.97□□□□□ -0.65
Ccl3P10855 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ccl3P10855 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.97□□□□□ -0.65
Ccl3P10855 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Ccl3P10855 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ccl3P10855 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Ccl3P10855 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC10.97□□□□□ -0.65
Ccl3P10855 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms