Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxb3P09026 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Hoxb3P09026 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxb3P09026 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxb3P09026 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxb3P09026 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxb3P09026 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hoxb3P09026 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hoxb3P09026 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hoxb3P09026 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxb3P09026 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxb3P09026 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxb3P09026 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxb3P09026 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxb3P09026 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hoxb3P09026 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxb3P09026 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxb3P09026 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxb3P09026 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.54□□□□□ -0.4
Hoxb3P09026 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Hoxb3P09026 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxb3P09026 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxb3P09026 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxb3P09026 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxb3P09026 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxb3P09026 Gm37863-201ENSMUST00000194911 1457 ntBASIC12.53□□□□□ -0.4
Hoxb3P09026 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxb3P09026 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.53□□□□□ -0.4
Hoxb3P09026 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.53□□□□□ -0.4
Hoxb3P09026 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxb3P09026 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxb3P09026 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxb3P09026 Gm16420-201ENSMUST00000120258 856 ntBASIC12.53□□□□□ -0.4
Hoxb3P09026 Gm12372-201ENSMUST00000121654 768 ntBASIC12.53□□□□□ -0.4
Hoxb3P09026 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxb3P09026 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.53□□□□□ -0.4
Hoxb3P09026 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxb3P09026 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxb3P09026 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxb3P09026 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hoxb3P09026 Mir6998-201ENSMUST00000183343 64 ntBASIC12.53□□□□□ -0.4
Hoxb3P09026 Gm28180-201ENSMUST00000189608 722 ntBASIC12.53□□□□□ -0.4
Hoxb3P09026 Gm38247-201ENSMUST00000194675 433 ntBASIC12.53□□□□□ -0.4
Hoxb3P09026 Gm6681-201ENSMUST00000205215 607 ntBASIC12.53□□□□□ -0.4
Hoxb3P09026 Gm18463-201ENSMUST00000207258 474 ntBASIC12.53□□□□□ -0.4
Hoxb3P09026 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.53□□□□□ -0.4
Hoxb3P09026 AC139323.1-201ENSMUST00000223370 1040 ntBASIC12.53□□□□□ -0.4
Hoxb3P09026 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.53□□□□□ -0.4
Hoxb3P09026 AC121357.1-201ENSMUST00000227365 608 ntBASIC12.53□□□□□ -0.4
Hoxb3P09026 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxb3P09026 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hoxb3P09026 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hoxb3P09026 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxb3P09026 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxb3P09026 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxb3P09026 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxb3P09026 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxb3P09026 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.53□□□□□ -0.4
Hoxb3P09026 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxb3P09026 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxb3P09026 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxb3P09026 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxb3P09026 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hoxb3P09026 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxb3P09026 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hoxb3P09026 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxb3P09026 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxb3P09026 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxb3P09026 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxb3P09026 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxb3P09026 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxb3P09026 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxb3P09026 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxb3P09026 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxb3P09026 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxb3P09026 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxb3P09026 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Hoxb3P09026 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxb3P09026 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxb3P09026 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxb3P09026 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
Hoxb3P09026 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxb3P09026 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxb3P09026 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxb3P09026 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.52□□□□□ -0.41
Hoxb3P09026 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxb3P09026 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.52□□□□□ -0.41
Hoxb3P09026 Gm12001-201ENSMUST00000121727 913 ntBASIC12.52□□□□□ -0.41
Hoxb3P09026 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Hoxb3P09026 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxb3P09026 Gm16296-201ENSMUST00000159905 325 ntBASIC12.52□□□□□ -0.41
Hoxb3P09026 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.52□□□□□ -0.41
Hoxb3P09026 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxb3P09026 Gm27046-201ENSMUST00000182160 463 ntBASIC12.52□□□□□ -0.41
Hoxb3P09026 Gm7003-201ENSMUST00000195089 312 ntBASIC12.52□□□□□ -0.41
Hoxb3P09026 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Hoxb3P09026 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxb3P09026 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxb3P09026 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxb3P09026 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms