Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.79□□□□□ -0.52
ApoeP08226 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.79□□□□□ -0.52
ApoeP08226 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.79□□□□□ -0.52
ApoeP08226 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.79□□□□□ -0.52
ApoeP08226 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Gm11618-201ENSMUST00000117946 267 ntBASIC11.79□□□□□ -0.52
ApoeP08226 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
ApoeP08226 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.79□□□□□ -0.52
ApoeP08226 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Mir7654-201ENSMUST00000185082 70 ntBASIC11.79□□□□□ -0.52
ApoeP08226 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.79□□□□□ -0.52
ApoeP08226 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.79□□□□□ -0.52
ApoeP08226 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
ApoeP08226 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ApoeP08226 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.79□□□□□ -0.52
ApoeP08226 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
ApoeP08226 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
ApoeP08226 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.79□□□□□ -0.52
ApoeP08226 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ApoeP08226 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.79□□□□□ -0.52
ApoeP08226 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.79□□□□□ -0.52
ApoeP08226 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.79□□□□□ -0.52
ApoeP08226 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
ApoeP08226 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ApoeP08226 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
ApoeP08226 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.78□□□□□ -0.52
ApoeP08226 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
ApoeP08226 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.78□□□□□ -0.52
ApoeP08226 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.78□□□□□ -0.52
ApoeP08226 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.78□□□□□ -0.52
ApoeP08226 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
ApoeP08226 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.78□□□□□ -0.52
ApoeP08226 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
ApoeP08226 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.78□□□□□ -0.52
ApoeP08226 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ApoeP08226 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
ApoeP08226 Gm12151-201ENSMUST00000121374 290 ntBASIC11.78□□□□□ -0.52
ApoeP08226 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
ApoeP08226 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.78□□□□□ -0.52
ApoeP08226 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.78□□□□□ -0.52
ApoeP08226 Gm16296-201ENSMUST00000159905 325 ntBASIC11.78□□□□□ -0.52
ApoeP08226 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.78□□□□□ -0.52
ApoeP08226 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.78□□□□□ -0.52
ApoeP08226 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.78□□□□□ -0.52
ApoeP08226 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.78□□□□□ -0.52
ApoeP08226 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.78□□□□□ -0.52
ApoeP08226 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
ApoeP08226 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ApoeP08226 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
ApoeP08226 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ApoeP08226 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
ApoeP08226 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ApoeP08226 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ApoeP08226 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms