Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.48□□□□□ -0.73
Hoxa3P02831 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.48□□□□□ -0.73
Hoxa3P02831 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.48□□□□□ -0.73
Hoxa3P02831 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Hoxa3P02831 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.48□□□□□ -0.73
Hoxa3P02831 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.48□□□□□ -0.73
Hoxa3P02831 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.48□□□□□ -0.73
Hoxa3P02831 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.48□□□□□ -0.73
Hoxa3P02831 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hoxa3P02831 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.47□□□□□ -0.73
Hoxa3P02831 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Hoxa3P02831 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Hoxa3P02831 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Hoxa3P02831 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Hoxa3P02831 Gm14726-201ENSMUST00000120623 896 ntBASIC10.47□□□□□ -0.73
Hoxa3P02831 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Gm16296-201ENSMUST00000159905 325 ntBASIC10.47□□□□□ -0.73
Hoxa3P02831 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.47□□□□□ -0.73
Hoxa3P02831 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.47□□□□□ -0.73
Hoxa3P02831 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Hoxa3P02831 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Hoxa3P02831 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.47□□□□□ -0.73
Hoxa3P02831 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.47□□□□□ -0.73
Hoxa3P02831 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Hoxa3P02831 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Hoxa3P02831 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.47□□□□□ -0.73
Hoxa3P02831 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.47□□□□□ -0.73
Hoxa3P02831 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hoxa3P02831 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.46□□□□□ -0.73
Hoxa3P02831 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Hoxa3P02831 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Hoxa3P02831 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hoxa3P02831 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.46□□□□□ -0.73
Hoxa3P02831 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Hoxa3P02831 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hoxa3P02831 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hoxa3P02831 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Hoxa3P02831 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hoxa3P02831 Gm13492-201ENSMUST00000119772 665 ntBASIC10.46□□□□□ -0.73
Hoxa3P02831 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.46□□□□□ -0.73
Hoxa3P02831 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.46□□□□□ -0.73
Hoxa3P02831 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.46□□□□□ -0.73
Hoxa3P02831 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.46□□□□□ -0.73
Hoxa3P02831 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.46□□□□□ -0.73
Hoxa3P02831 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.46□□□□□ -0.73
Hoxa3P02831 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.46□□□□□ -0.73
Hoxa3P02831 Gm5904-201ENSMUST00000210286 865 ntBASIC10.46□□□□□ -0.73
Hoxa3P02831 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Hoxa3P02831 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.46□□□□□ -0.73
Hoxa3P02831 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.46□□□□□ -0.73
Hoxa3P02831 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hoxa3P02831 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Hoxa3P02831 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Hoxa3P02831 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms