Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Copb2O55029 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Copb2O55029 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Copb2O55029 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.33□□□□□ -0.12
Copb2O55029 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.33□□□□□ -0.12
Copb2O55029 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.33□□□□□ -0.12
Copb2O55029 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.33□□□□□ -0.12
Copb2O55029 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.33□□□□□ -0.12
Copb2O55029 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Copb2O55029 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Copb2O55029 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Copb2O55029 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Copb2O55029 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Copb2O55029 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.33□□□□□ -0.12
Copb2O55029 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.33□□□□□ -0.12
Copb2O55029 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Copb2O55029 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.32□□□□□ -0.12
Copb2O55029 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Copb2O55029 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Copb2O55029 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Gm12015-201ENSMUST00000117065 843 ntBASIC14.32□□□□□ -0.12
Copb2O55029 Gm13996-201ENSMUST00000118456 430 ntBASIC14.32□□□□□ -0.12
Copb2O55029 Gm12217-201ENSMUST00000118858 696 ntBASIC14.32□□□□□ -0.12
Copb2O55029 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.32□□□□□ -0.12
Copb2O55029 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Copb2O55029 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.32□□□□□ -0.12
Copb2O55029 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.32□□□□□ -0.12
Copb2O55029 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.32□□□□□ -0.12
Copb2O55029 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Copb2O55029 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Copb2O55029 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.31□□□□□ -0.12
Copb2O55029 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.31□□□□□ -0.12
Copb2O55029 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.31□□□□□ -0.12
Copb2O55029 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Copb2O55029 Mir6927-201ENSMUST00000184494 71 ntBASIC14.31□□□□□ -0.12
Copb2O55029 Gm28450-201ENSMUST00000187349 638 ntBASIC14.31□□□□□ -0.12
Copb2O55029 Gm7003-201ENSMUST00000195089 312 ntBASIC14.31□□□□□ -0.12
Copb2O55029 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.31□□□□□ -0.12
Copb2O55029 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Copb2O55029 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Copb2O55029 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms