Protein–RNA interactions for Protein: O35943

Fxn, Frataxin, mitochondrial, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FxnO35943 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FxnO35943 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
FxnO35943 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FxnO35943 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
FxnO35943 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FxnO35943 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
FxnO35943 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
FxnO35943 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
FxnO35943 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.72□□□□□ -0.53
FxnO35943 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.72□□□□□ -0.53
FxnO35943 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.72□□□□□ -0.53
FxnO35943 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
FxnO35943 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.72□□□□□ -0.53
FxnO35943 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 Gm13369-201ENSMUST00000119442 987 ntBASIC11.72□□□□□ -0.53
FxnO35943 Gm12138-201ENSMUST00000122180 951 ntBASIC11.72□□□□□ -0.53
FxnO35943 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.72□□□□□ -0.53
FxnO35943 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.72□□□□□ -0.53
FxnO35943 Gm24644-201ENSMUST00000157114 139 ntBASIC11.72□□□□□ -0.53
FxnO35943 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.72□□□□□ -0.53
FxnO35943 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.72□□□□□ -0.53
FxnO35943 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.72□□□□□ -0.53
FxnO35943 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.72□□□□□ -0.53
FxnO35943 AC125117.2-201ENSMUST00000228344 1140 ntBASIC11.72□□□□□ -0.53
FxnO35943 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
FxnO35943 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
FxnO35943 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
FxnO35943 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
FxnO35943 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
FxnO35943 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.71□□□□□ -0.53
FxnO35943 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
FxnO35943 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
FxnO35943 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.71□□□□□ -0.53
FxnO35943 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
FxnO35943 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
FxnO35943 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
FxnO35943 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
FxnO35943 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
FxnO35943 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
FxnO35943 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.71□□□□□ -0.53
FxnO35943 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.71□□□□□ -0.53
FxnO35943 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
FxnO35943 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
FxnO35943 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
FxnO35943 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
FxnO35943 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
FxnO35943 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.71□□□□□ -0.53
FxnO35943 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
FxnO35943 Gm11478-201ENSMUST00000117851 599 ntBASIC11.71□□□□□ -0.53
FxnO35943 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.71□□□□□ -0.53
FxnO35943 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.71□□□□□ -0.53
FxnO35943 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
FxnO35943 Gm27331-201ENSMUST00000183705 60 ntBASIC11.71□□□□□ -0.53
FxnO35943 Gm29649-201ENSMUST00000185649 419 ntBASIC11.71□□□□□ -0.53
FxnO35943 Gm21156-201ENSMUST00000189693 869 ntBASIC11.71□□□□□ -0.53
FxnO35943 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.71□□□□□ -0.53
FxnO35943 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.71□□□□□ -0.53
FxnO35943 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
FxnO35943 Gm29705-201ENSMUST00000212598 474 ntBASIC11.71□□□□□ -0.53
FxnO35943 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
FxnO35943 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
FxnO35943 Gm10146-201ENSMUST00000072739 309 ntBASIC11.71□□□□□ -0.53
FxnO35943 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.71□□□□□ -0.53
FxnO35943 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
FxnO35943 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
FxnO35943 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
FxnO35943 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
FxnO35943 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.71□□□□□ -0.54
FxnO35943 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.71□□□□□ -0.54
FxnO35943 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
FxnO35943 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
FxnO35943 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
FxnO35943 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
FxnO35943 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
FxnO35943 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.71□□□□□ -0.54
FxnO35943 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
FxnO35943 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
FxnO35943 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
FxnO35943 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
FxnO35943 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
FxnO35943 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms