Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Matn2-203ENSMUST00000226766 3252 ntBASIC12.19□□□□□ -0.46
Npc1O35604 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npc1O35604 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npc1O35604 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Npc1O35604 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npc1O35604 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npc1O35604 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npc1O35604 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npc1O35604 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npc1O35604 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Npc1O35604 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Npc1O35604 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npc1O35604 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.19□□□□□ -0.46
Npc1O35604 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.19□□□□□ -0.46
Npc1O35604 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npc1O35604 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npc1O35604 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Npc1O35604 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Npc1O35604 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Npc1O35604 Pck2-205ENSMUST00000226352 2784 ntBASIC12.18□□□□□ -0.46
Npc1O35604 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Npc1O35604 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npc1O35604 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.18□□□□□ -0.46
Npc1O35604 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Npc1O35604 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npc1O35604 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npc1O35604 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Npc1O35604 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.18□□□□□ -0.46
Npc1O35604 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Npc1O35604 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Npc1O35604 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.18□□□□□ -0.46
Npc1O35604 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.18□□□□□ -0.46
Npc1O35604 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Npc1O35604 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.18□□□□□ -0.46
Npc1O35604 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Npc1O35604 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npc1O35604 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.18□□□□□ -0.46
Npc1O35604 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npc1O35604 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Npc1O35604 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npc1O35604 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Npc1O35604 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.18□□□□□ -0.46
Npc1O35604 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Npc1O35604 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Npc1O35604 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Npc1O35604 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Npc1O35604 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Npc1O35604 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.17□□□□□ -0.46
Npc1O35604 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.17□□□□□ -0.46
Npc1O35604 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Npc1O35604 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.17□□□□□ -0.46
Npc1O35604 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.17□□□□□ -0.46
Npc1O35604 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.17□□□□□ -0.46
Npc1O35604 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Npc1O35604 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.17□□□□□ -0.46
Npc1O35604 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Gm24255-201ENSMUST00000104481 128 ntBASIC12.17□□□□□ -0.46
Npc1O35604 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.17□□□□□ -0.46
Npc1O35604 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.17□□□□□ -0.46
Npc1O35604 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Gm2546-201ENSMUST00000182630 991 ntBASIC12.17□□□□□ -0.46
Npc1O35604 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.17□□□□□ -0.46
Npc1O35604 Gm6334-201ENSMUST00000207083 228 ntBASIC12.17□□□□□ -0.46
Npc1O35604 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.17□□□□□ -0.46
Npc1O35604 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.17□□□□□ -0.46
Npc1O35604 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.17□□□□□ -0.46
Npc1O35604 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.17□□□□□ -0.46
Npc1O35604 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Npc1O35604 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.17□□□□□ -0.46
Npc1O35604 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Gm9257-201ENSMUST00000221254 232 ntBASIC12.17□□□□□ -0.46
Npc1O35604 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.17□□□□□ -0.46
Npc1O35604 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.17□□□□□ -0.46
Npc1O35604 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Npc1O35604 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Npc1O35604 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Npc1O35604 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Npc1O35604 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Npc1O35604 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Npc1O35604 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Npc1O35604 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Npc1O35604 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms