Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 BC043934-202ENSMUST00000185694 2356 ntBASIC10.86□□□□□ -0.67
Cldn20G5E8X0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Gm7653-201ENSMUST00000214567 508 ntBASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn20G5E8X0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Gm12928-201ENSMUST00000117115 573 ntBASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Gm26035-201ENSMUST00000083065 308 ntBASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.85□□□□□ -0.67
Cldn20G5E8X0 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn20G5E8X0 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.84□□□□□ -0.67
Cldn20G5E8X0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms