Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Syngap1F6SEU4 Mir7221-201ENSMUST00000184009 72 ntBASIC14.04□□□□□ -0.16
Syngap1F6SEU4 Gm44651-201ENSMUST00000207343 372 ntBASIC14.04□□□□□ -0.16
Syngap1F6SEU4 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC14.04□□□□□ -0.16
Syngap1F6SEU4 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.04□□□□□ -0.16
Syngap1F6SEU4 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.04□□□□□ -0.16
Syngap1F6SEU4 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syngap1F6SEU4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Syngap1F6SEU4 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Syngap1F6SEU4 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syngap1F6SEU4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syngap1F6SEU4 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Syngap1F6SEU4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Syngap1F6SEU4 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Syngap1F6SEU4 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syngap1F6SEU4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Syngap1F6SEU4 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.03□□□□□ -0.16
Syngap1F6SEU4 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Gm23363-201ENSMUST00000175024 79 ntBASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Gm38092-201ENSMUST00000195600 653 ntBASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syngap1F6SEU4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syngap1F6SEU4 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.02□□□□□ -0.16
Syngap1F6SEU4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Syngap1F6SEU4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Syngap1F6SEU4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syngap1F6SEU4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syngap1F6SEU4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Syngap1F6SEU4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Syngap1F6SEU4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syngap1F6SEU4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Syngap1F6SEU4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syngap1F6SEU4 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syngap1F6SEU4 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syngap1F6SEU4 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Syngap1F6SEU4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syngap1F6SEU4 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syngap1F6SEU4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Prrxl1-205ENSMUST00000228878 723 ntBASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syngap1F6SEU4 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms