Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.53□□□□□ -0.4
Gm28043E0CXC2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Gm27839-201ENSMUST00000184242 106 ntBASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Gm37922-201ENSMUST00000195596 455 ntBASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.53□□□□□ -0.4
Gm28043E0CXC2 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm28043E0CXC2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm28043E0CXC2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm28043E0CXC2 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm28043E0CXC2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Gm28043E0CXC2 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.52□□□□□ -0.4
Gm28043E0CXC2 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm28043E0CXC2 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Gm28043E0CXC2 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm28043E0CXC2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Gm28043E0CXC2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Gm28043E0CXC2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Gm28043E0CXC2 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Gm27847-201ENSMUST00000183711 107 ntBASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Gm5745-201ENSMUST00000183748 313 ntBASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Gm27375-201ENSMUST00000183799 107 ntBASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Gm7561-201ENSMUST00000211203 886 ntBASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm28043E0CXC2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28043E0CXC2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms