Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.17□□□□□ -0.46
Clip3B9EHT4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.17□□□□□ -0.46
Clip3B9EHT4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.17□□□□□ -0.46
Clip3B9EHT4 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Gm14723-201ENSMUST00000118686 215 ntBASIC12.17□□□□□ -0.46
Clip3B9EHT4 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.17□□□□□ -0.46
Clip3B9EHT4 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.17□□□□□ -0.46
Clip3B9EHT4 Gm5904-201ENSMUST00000210286 865 ntBASIC12.17□□□□□ -0.46
Clip3B9EHT4 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clip3B9EHT4 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Gm12241-201ENSMUST00000118330 726 ntBASIC12.16□□□□□ -0.46
Clip3B9EHT4 Mir8109-201ENSMUST00000184375 117 ntBASIC12.16□□□□□ -0.46
Clip3B9EHT4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Gm44364-201ENSMUST00000198368 141 ntBASIC12.16□□□□□ -0.46
Clip3B9EHT4 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.16□□□□□ -0.46
Clip3B9EHT4 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clip3B9EHT4 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.15□□□□□ -0.46
Clip3B9EHT4 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.15□□□□□ -0.46
Clip3B9EHT4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.15□□□□□ -0.46
Clip3B9EHT4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clip3B9EHT4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms