Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm23272-201ENSMUST00000104053 129 ntBASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Gm9139-201ENSMUST00000218817 700 ntBASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Gm13600-201ENSMUST00000117949 744 ntBASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Gm12990-201ENSMUST00000120372 468 ntBASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Gm8531-201ENSMUST00000188319 893 ntBASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Gm44506-201ENSMUST00000206278 965 ntBASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Gm2553-201ENSMUST00000215986 605 ntBASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col4a6B1AVK5 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Gm14942-201ENSMUST00000119642 336 ntBASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Gm12628-201ENSMUST00000122193 382 ntBASIC12.55□□□□□ -0.4
Col4a6B1AVK5 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Gm29410-201ENSMUST00000188383 694 ntBASIC12.55□□□□□ -0.4
Col4a6B1AVK5 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.55□□□□□ -0.4
Col4a6B1AVK5 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Gm8325-201ENSMUST00000099086 453 ntBASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col4a6B1AVK5 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Gm12030-201ENSMUST00000121917 223 ntBASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms