Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13□□□□□ -0.33
Scn1aA2APX8 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13□□□□□ -0.33
Scn1aA2APX8 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 Gm23949-201ENSMUST00000104027 127 ntBASIC13□□□□□ -0.33
Scn1aA2APX8 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13□□□□□ -0.33
Scn1aA2APX8 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Scn1aA2APX8 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13□□□□□ -0.33
Scn1aA2APX8 Gm4034-201ENSMUST00000187674 480 ntBASIC13□□□□□ -0.33
Scn1aA2APX8 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13□□□□□ -0.33
Scn1aA2APX8 Gm18212-201ENSMUST00000211678 889 ntBASIC13□□□□□ -0.33
Scn1aA2APX8 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13□□□□□ -0.33
Scn1aA2APX8 Dhrs4-202ENSMUST00000226168 828 ntBASIC13□□□□□ -0.33
Scn1aA2APX8 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13□□□□□ -0.33
Scn1aA2APX8 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Scn1aA2APX8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Gm17812-201ENSMUST00000204935 318 ntBASIC12.99□□□□□ -0.33
Scn1aA2APX8 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Scn1aA2APX8 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.99□□□□□ -0.33
Scn1aA2APX8 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Scn1aA2APX8 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.98□□□□□ -0.33
Scn1aA2APX8 Gm37466-201ENSMUST00000195692 652 ntBASIC12.98□□□□□ -0.33
Scn1aA2APX8 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.98□□□□□ -0.33
Scn1aA2APX8 Gm14017-201ENSMUST00000121934 386 ntBASIC12.98□□□□□ -0.33
Scn1aA2APX8 Gm16505-201ENSMUST00000179981 232 ntBASIC12.98□□□□□ -0.33
Scn1aA2APX8 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Gm44124-201ENSMUST00000204159 472 ntBASIC12.98□□□□□ -0.33
Scn1aA2APX8 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.98□□□□□ -0.33
Scn1aA2APX8 Gm45598-202ENSMUST00000210719 986 ntBASIC12.98□□□□□ -0.33
Scn1aA2APX8 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn1aA2APX8 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.97□□□□□ -0.33
Scn1aA2APX8 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.97□□□□□ -0.33
Scn1aA2APX8 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.97□□□□□ -0.33
Scn1aA2APX8 Gm14247-201ENSMUST00000120950 237 ntBASIC12.97□□□□□ -0.33
Scn1aA2APX8 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms