Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gm25492-201ENSMUST00000157383 129 ntBASIC6.38□□□□□ -1.39
Ubr4A2AN08 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Mir6387-201ENSMUST00000184042 108 ntBASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gm45225-201ENSMUST00000206852 1139 ntBASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gm23105-201ENSMUST00000083719 134 ntBASIC6.38□□□□□ -1.39
Ubr4A2AN08 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gm8617-201ENSMUST00000118796 2222 ntBASIC6.38□□□□□ -1.39
Ubr4A2AN08 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gm12291-201ENSMUST00000121627 311 ntBASIC6.38□□□□□ -1.39
Ubr4A2AN08 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 5730420D15Rik-201ENSMUST00000181781 1182 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Apool-201ENSMUST00000026599 1359 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 AC154482.1-201ENSMUST00000223248 2483 ntBASIC6.38□□□□□ -1.39
Ubr4A2AN08 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gm21451-201ENSMUST00000111062 2775 ntBASIC6.38□□□□□ -1.39
Ubr4A2AN08 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gm16209-201ENSMUST00000118457 627 ntBASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gm10171-201ENSMUST00000126220 628 ntBASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gm25569-201ENSMUST00000157175 131 ntBASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gm26272-201ENSMUST00000179241 132 ntBASIC6.38□□□□□ -1.39
Ubr4A2AN08 AC159196.1-201ENSMUST00000225524 377 ntBASIC6.38□□□□□ -1.39
Ubr4A2AN08 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gm10233-201ENSMUST00000089275 628 ntBASIC6.38□□□□□ -1.39
Ubr4A2AN08 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC6.38□□□□□ -1.39
Ubr4A2AN08 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC6.38□□□□□ -1.39
Ubr4A2AN08 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ubr4A2AN08 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ubr4A2AN08 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Ubr4A2AN08 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ubr4A2AN08 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ubr4A2AN08 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ubr4A2AN08 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ubr4A2AN08 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ubr4A2AN08 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
Ubr4A2AN08 Gm25562-201ENSMUST00000104608 133 ntBASIC6.37□□□□□ -1.39
Ubr4A2AN08 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC6.37□□□□□ -1.39
Ubr4A2AN08 Gm24352-201ENSMUST00000158966 125 ntBASIC6.37□□□□□ -1.39
Ubr4A2AN08 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC6.37□□□□□ -1.39
Ubr4A2AN08 Gm8488-201ENSMUST00000176112 1280 ntBASIC6.37□□□□□ -1.39
Ubr4A2AN08 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC6.37□□□□□ -1.39
Ubr4A2AN08 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC6.37□□□□□ -1.39
Ubr4A2AN08 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC6.37□□□□□ -1.39
Ubr4A2AN08 Gm9771-201ENSMUST00000198267 1137 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms