Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gm16296-201ENSMUST00000159905 325 ntBASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc194A0A140LIT1 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc194A0A140LIT1 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Ccdc194A0A140LIT1 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Ccdc194A0A140LIT1 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.43
Ccdc194A0A140LIT1 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc194A0A140LIT1 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Gm13492-201ENSMUST00000119772 665 ntBASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Gm12490-201ENSMUST00000120255 560 ntBASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Gm29649-201ENSMUST00000185649 419 ntBASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Gm32025-201ENSMUST00000217960 307 ntBASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc194A0A140LIT1 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc194A0A140LIT1 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms