Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm5466-201ENSMUST00000119395 1890 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm12537-201ENSMUST00000119266 1002 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm12070-201ENSMUST00000119551 1002 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm12671-201ENSMUST00000119978 1002 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm13292-201ENSMUST00000120014 1000 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm12403-201ENSMUST00000121384 959 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm10359-201ENSMUST00000180167 1002 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm12033-201ENSMUST00000180654 1002 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm5559-201ENSMUST00000180755 1002 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm4335-201ENSMUST00000182581 1004 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm27618-201ENSMUST00000183671 60 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm17837-201ENSMUST00000186435 985 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm37171-201ENSMUST00000192636 1185 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm44985-201ENSMUST00000206202 1016 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 AC165157.4-201ENSMUST00000220587 139 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm43273-201ENSMUST00000199649 2594 ntBASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm14701-201ENSMUST00000117156 348 ntBASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm12485-201ENSMUST00000119641 291 ntBASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm6161-201ENSMUST00000121942 1102 ntBASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm6254-201ENSMUST00000168178 1072 ntBASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm6153-201ENSMUST00000172004 1058 ntBASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm5641-202ENSMUST00000198699 1080 ntBASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav3n-3A0A0G2JEM0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 156.2 ms