Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.92□□□□□ -0.34
Speer3W4VSP1 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.92□□□□□ -0.34
Speer3W4VSP1 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Gm14301-201ENSMUST00000120181 324 ntBASIC12.92□□□□□ -0.34
Speer3W4VSP1 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.92□□□□□ -0.34
Speer3W4VSP1 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Gm23984-201ENSMUST00000157139 203 ntBASIC12.92□□□□□ -0.34
Speer3W4VSP1 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Speer3W4VSP1 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Gm43906-201ENSMUST00000203194 906 ntBASIC12.92□□□□□ -0.34
Speer3W4VSP1 Gm18944-201ENSMUST00000207672 643 ntBASIC12.92□□□□□ -0.34
Speer3W4VSP1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 AC131743.3-201ENSMUST00000222099 662 ntBASIC12.92□□□□□ -0.34
Speer3W4VSP1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.92□□□□□ -0.34
Speer3W4VSP1 AC152169.2-201ENSMUST00000224558 613 ntBASIC12.92□□□□□ -0.34
Speer3W4VSP1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.92□□□□□ -0.34
Speer3W4VSP1 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.92□□□□□ -0.34
Speer3W4VSP1 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.92□□□□□ -0.34
Speer3W4VSP1 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Speer3W4VSP1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.91□□□□□ -0.34
Speer3W4VSP1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Gm13689-201ENSMUST00000119360 685 ntBASIC12.91□□□□□ -0.34
Speer3W4VSP1 Gm11918-201ENSMUST00000121660 179 ntBASIC12.91□□□□□ -0.34
Speer3W4VSP1 Gm13487-201ENSMUST00000122240 864 ntBASIC12.91□□□□□ -0.34
Speer3W4VSP1 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Gm5277-201ENSMUST00000164923 556 ntBASIC12.91□□□□□ -0.34
Speer3W4VSP1 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Gm20659-201ENSMUST00000176599 604 ntTSL 3 BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Gm6745-201ENSMUST00000199216 526 ntBASIC12.91□□□□□ -0.34
Speer3W4VSP1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.91□□□□□ -0.34
Speer3W4VSP1 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Speer3W4VSP1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Speer3W4VSP1 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.9□□□□□ -0.34
Speer3W4VSP1 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Speer3W4VSP1 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Speer3W4VSP1 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Speer3W4VSP1 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Speer3W4VSP1 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.9□□□□□ -0.34
Speer3W4VSP1 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms