Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Gm13369-201ENSMUST00000119442 987 ntBASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Gm11803-201ENSMUST00000119966 444 ntBASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Gm8810-201ENSMUST00000172895 754 ntBASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Gm6244-201ENSMUST00000178732 841 ntBASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Gm19184-201ENSMUST00000196798 928 ntBASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb3S4R1G7 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Gm12203-201ENSMUST00000118235 598 ntBASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Gm12209-201ENSMUST00000120089 596 ntBASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Gm22121-201ENSMUST00000175148 54 ntBASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Gm9002-201ENSMUST00000178437 499 ntBASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.25□□□□□ -0.61
H2afb3S4R1G7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.25□□□□□ -0.61
H2afb3S4R1G7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms