Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
AmfrQ9R049 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.97□□□□□ -0.17
AmfrQ9R049 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
AmfrQ9R049 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
AmfrQ9R049 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.97□□□□□ -0.17
AmfrQ9R049 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.97□□□□□ -0.17
AmfrQ9R049 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.97□□□□□ -0.17
AmfrQ9R049 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
AmfrQ9R049 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.97□□□□□ -0.17
AmfrQ9R049 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.97□□□□□ -0.17
AmfrQ9R049 Gm3890-201ENSMUST00000182416 207 ntBASIC13.97□□□□□ -0.17
AmfrQ9R049 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Gm6013-201ENSMUST00000212264 699 ntBASIC13.97□□□□□ -0.17
AmfrQ9R049 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.97□□□□□ -0.17
AmfrQ9R049 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Gm7399-201ENSMUST00000032395 858 ntBASIC13.97□□□□□ -0.17
AmfrQ9R049 Gm9823-201ENSMUST00000051212 327 ntBASIC13.97□□□□□ -0.17
AmfrQ9R049 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
AmfrQ9R049 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
AmfrQ9R049 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.97□□□□□ -0.17
AmfrQ9R049 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.97□□□□□ -0.17
AmfrQ9R049 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
AmfrQ9R049 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
AmfrQ9R049 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
AmfrQ9R049 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AmfrQ9R049 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AmfrQ9R049 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AmfrQ9R049 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
AmfrQ9R049 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AmfrQ9R049 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
AmfrQ9R049 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.96□□□□□ -0.17
AmfrQ9R049 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AmfrQ9R049 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
AmfrQ9R049 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AmfrQ9R049 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
AmfrQ9R049 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AmfrQ9R049 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AmfrQ9R049 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AmfrQ9R049 Gm11793-201ENSMUST00000120433 981 ntBASIC13.96□□□□□ -0.17
AmfrQ9R049 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AmfrQ9R049 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.96□□□□□ -0.17
AmfrQ9R049 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.96□□□□□ -0.17
AmfrQ9R049 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.96□□□□□ -0.17
AmfrQ9R049 Gm18584-201ENSMUST00000203098 964 ntBASIC13.96□□□□□ -0.17
AmfrQ9R049 Gm44124-201ENSMUST00000204159 472 ntBASIC13.96□□□□□ -0.17
AmfrQ9R049 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.96□□□□□ -0.17
AmfrQ9R049 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
AmfrQ9R049 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
AmfrQ9R049 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AmfrQ9R049 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AmfrQ9R049 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
AmfrQ9R049 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AmfrQ9R049 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.96□□□□□ -0.18
AmfrQ9R049 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AmfrQ9R049 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
AmfrQ9R049 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
AmfrQ9R049 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
AmfrQ9R049 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
AmfrQ9R049 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.95□□□□□ -0.18
AmfrQ9R049 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
AmfrQ9R049 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.95□□□□□ -0.18
AmfrQ9R049 Gm13786-201ENSMUST00000122371 333 ntBASIC13.95□□□□□ -0.18
AmfrQ9R049 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.95□□□□□ -0.18
AmfrQ9R049 Gm42627-201ENSMUST00000197347 224 ntBASIC13.95□□□□□ -0.18
AmfrQ9R049 Gm8099-201ENSMUST00000200510 742 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms