Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm26315-201ENSMUST00000083890 321 ntBASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Mir339-201ENSMUST00000083659 96 ntBASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgn3Q9DCB1 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgn3Q9DCB1 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Gm12384-201ENSMUST00000119228 919 ntBASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Gm26464-201ENSMUST00000157094 305 ntBASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgn3Q9DCB1 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms