Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2aQ9DB34 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Mir1247-201ENSMUST00000116706 82 ntBASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Gm6007-201ENSMUST00000208170 823 ntBASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Gm45331-201ENSMUST00000209868 554 ntBASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2aQ9DB34 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Gm45925-201ENSMUST00000218882 744 ntBASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2aQ9DB34 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2aQ9DB34 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.02□□□□□ -0.32
Chmp2aQ9DB34 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2aQ9DB34 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2aQ9DB34 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2aQ9DB34 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2aQ9DB34 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2aQ9DB34 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Chmp2aQ9DB34 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
Chmp2aQ9DB34 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
Chmp2aQ9DB34 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2aQ9DB34 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2aQ9DB34 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2aQ9DB34 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Gm13875-201ENSMUST00000120162 282 ntBASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.02□□□□□ -0.33
Chmp2aQ9DB34 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms