Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
U2af1Q9D883 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
U2af1Q9D883 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
U2af1Q9D883 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
U2af1Q9D883 AC126444.1-201ENSMUST00000225938 1768 ntBASIC16.4■□□□□ 0.22
U2af1Q9D883 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
U2af1Q9D883 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
U2af1Q9D883 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
U2af1Q9D883 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
U2af1Q9D883 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
U2af1Q9D883 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
U2af1Q9D883 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
U2af1Q9D883 Gm45266-201ENSMUST00000210111 2173 ntBASIC16.4■□□□□ 0.22
U2af1Q9D883 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
U2af1Q9D883 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
U2af1Q9D883 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
U2af1Q9D883 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
U2af1Q9D883 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
U2af1Q9D883 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
U2af1Q9D883 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
U2af1Q9D883 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC16.39■□□□□ 0.21
U2af1Q9D883 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 Gm4819-201ENSMUST00000182170 1009 ntBASIC16.39■□□□□ 0.21
U2af1Q9D883 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
U2af1Q9D883 AC126253.1-202ENSMUST00000226732 835 ntBASIC16.39■□□□□ 0.21
U2af1Q9D883 AC093022.1-201ENSMUST00000226949 1072 ntBASIC16.39■□□□□ 0.21
U2af1Q9D883 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
U2af1Q9D883 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC16.39■□□□□ 0.21
U2af1Q9D883 Gm38385-201ENSMUST00000194454 2351 ntBASIC16.39■□□□□ 0.21
U2af1Q9D883 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
U2af1Q9D883 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
U2af1Q9D883 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Gm13142-201ENSMUST00000117213 1453 ntBASIC16.38■□□□□ 0.21
U2af1Q9D883 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC16.38■□□□□ 0.21
U2af1Q9D883 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC16.38■□□□□ 0.21
U2af1Q9D883 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
U2af1Q9D883 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC16.38■□□□□ 0.21
U2af1Q9D883 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Gm44958-201ENSMUST00000203734 736 ntBASIC16.38■□□□□ 0.21
U2af1Q9D883 Gm18056-201ENSMUST00000207670 568 ntBASIC16.38■□□□□ 0.21
U2af1Q9D883 Gm18061-201ENSMUST00000208350 562 ntBASIC16.38■□□□□ 0.21
U2af1Q9D883 Gm18063-201ENSMUST00000208529 568 ntBASIC16.38■□□□□ 0.21
U2af1Q9D883 Gm18052-201ENSMUST00000208750 559 ntBASIC16.38■□□□□ 0.21
U2af1Q9D883 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC16.38■□□□□ 0.21
U2af1Q9D883 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
U2af1Q9D883 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
U2af1Q9D883 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
U2af1Q9D883 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
U2af1Q9D883 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
U2af1Q9D883 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC16.37■□□□□ 0.21
U2af1Q9D883 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
U2af1Q9D883 Gm2606-201ENSMUST00000100754 1002 ntBASIC16.37■□□□□ 0.21
U2af1Q9D883 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
U2af1Q9D883 Gm12286-201ENSMUST00000119246 1002 ntBASIC16.37■□□□□ 0.21
U2af1Q9D883 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
U2af1Q9D883 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC16.37■□□□□ 0.21
U2af1Q9D883 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
U2af1Q9D883 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC16.37■□□□□ 0.21
U2af1Q9D883 Gzmn-202ENSMUST00000225535 989 ntBASIC16.37■□□□□ 0.21
U2af1Q9D883 Rassf8-202ENSMUST00000058538 1131 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms