Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Gm38223-201ENSMUST00000194484 695 ntBASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Gm7775-201ENSMUST00000218871 853 ntBASIC12.54□□□□□ -0.4
Trim42Q9D2H5 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim42Q9D2H5 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.53□□□□□ -0.4
Trim42Q9D2H5 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.53□□□□□ -0.4
Trim42Q9D2H5 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms