Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Gm24845-201ENSMUST00000158034 109 ntBASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Gm8885-201ENSMUST00000189382 598 ntBASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Gm14017-201ENSMUST00000121934 386 ntBASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Gm18212-201ENSMUST00000211678 889 ntBASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm7Q9CQQ8 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Gm5363-201ENSMUST00000211927 938 ntBASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.6□□□□□ -0.39
Lsm7Q9CQQ8 Gzmn-202ENSMUST00000225535 989 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms