Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Gm10434-201ENSMUST00000101158 471 ntBASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rpa3Q9CQ71 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Gm24231-201ENSMUST00000104315 133 ntBASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Gm10478-201ENSMUST00000084451 396 ntBASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rpa3Q9CQ71 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rpa3Q9CQ71 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rpa3Q9CQ71 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rpa3Q9CQ71 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Rpa3Q9CQ71 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rpa3Q9CQ71 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rpa3Q9CQ71 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rpa3Q9CQ71 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Rpa3Q9CQ71 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rpa3Q9CQ71 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Rpa3Q9CQ71 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Gm13392-201ENSMUST00000117708 150 ntBASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms