Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Gm28693-202ENSMUST00000190758 331 ntBASIC11.26□□□□□ -0.61
Krt88Q9CPR6 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Gm14760-201ENSMUST00000121831 999 ntBASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Mir8102-201ENSMUST00000184148 139 ntBASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.25□□□□□ -0.61
Krt88Q9CPR6 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.25□□□□□ -0.61
Krt88Q9CPR6 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Mir6977-201ENSMUST00000184960 64 ntBASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms