Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.47□□□□□ -0.41
Trim33Q99PP7 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.47□□□□□ -0.41
Trim33Q99PP7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.47□□□□□ -0.41
Trim33Q99PP7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.47□□□□□ -0.41
Trim33Q99PP7 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.47□□□□□ -0.41
Trim33Q99PP7 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Gm11591-201ENSMUST00000120063 702 ntBASIC12.47□□□□□ -0.41
Trim33Q99PP7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Gm6222-202ENSMUST00000182143 629 ntBASIC12.47□□□□□ -0.41
Trim33Q99PP7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.47□□□□□ -0.41
Trim33Q99PP7 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim33Q99PP7 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.47□□□□□ -0.41
Trim33Q99PP7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim33Q99PP7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.46□□□□□ -0.41
Trim33Q99PP7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.46□□□□□ -0.41
Trim33Q99PP7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Gm12957-201ENSMUST00000117835 377 ntBASIC12.46□□□□□ -0.41
Trim33Q99PP7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Gm25261-201ENSMUST00000157416 134 ntBASIC12.46□□□□□ -0.41
Trim33Q99PP7 Gm37424-201ENSMUST00000191727 561 ntBASIC12.46□□□□□ -0.41
Trim33Q99PP7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Gm40332-201ENSMUST00000199847 938 ntBASIC12.46□□□□□ -0.41
Trim33Q99PP7 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim33Q99PP7 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim33Q99PP7 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.46□□□□□ -0.42
Trim33Q99PP7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim33Q99PP7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim33Q99PP7 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim33Q99PP7 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim33Q99PP7 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim33Q99PP7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim33Q99PP7 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.46□□□□□ -0.42
Trim33Q99PP7 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim33Q99PP7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim33Q99PP7 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms