Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm5599-201ENSMUST00000209602 788 ntBASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Gm39288-201ENSMUST00000210554 446 ntBASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Gm5700-201ENSMUST00000191483 989 ntBASIC12.36□□□□□ -0.43
Cdh23Q99PF4 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Gm9022-201ENSMUST00000182482 992 ntBASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Gm8197-202ENSMUST00000193422 934 ntBASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Gm20694-201ENSMUST00000176943 404 ntBASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Gm42430-201ENSMUST00000197209 616 ntBASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 BC106175-202ENSMUST00000219344 1213 ntBASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 AC107763.1-201ENSMUST00000226082 1365 ntBASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.35□□□□□ -0.43
Cdh23Q99PF4 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdh23Q99PF4 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.34□□□□□ -0.43
Cdh23Q99PF4 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Gm7211-201ENSMUST00000172692 1118 ntBASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Gm43852-201ENSMUST00000202098 917 ntBASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Gm45113-201ENSMUST00000207518 165 ntBASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms