Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm44329-201ENSMUST00000197469 112 ntBASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Gm5599-201ENSMUST00000209602 788 ntBASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.96□□□□□ -0.34
Col25a1Q99MQ5 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col25a1Q99MQ5 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col25a1Q99MQ5 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col25a1Q99MQ5 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 AC137950.2-202ENSMUST00000227150 1635 ntBASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Gm12419-201ENSMUST00000116649 636 ntBASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Gm5616-201ENSMUST00000165252 384 ntBASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Gm18201-201ENSMUST00000174735 875 ntBASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Gm8741-201ENSMUST00000174736 384 ntBASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Gm37201-201ENSMUST00000191845 523 ntBASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Gm17831-201ENSMUST00000205579 900 ntBASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Gm6905-201ENSMUST00000205729 511 ntBASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col25a1Q99MQ5 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Gm38092-201ENSMUST00000195600 653 ntBASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col25a1Q99MQ5 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.93□□□□□ -0.34
Col25a1Q99MQ5 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms