Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm12384-201ENSMUST00000119228 919 ntBASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Gm12363-201ENSMUST00000122250 668 ntBASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Gm8652-201ENSMUST00000181363 964 ntBASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Gm7063-201ENSMUST00000186840 981 ntBASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Gm11814-201ENSMUST00000119515 929 ntBASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Gm22331-201ENSMUST00000158066 136 ntBASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Gm27892-201ENSMUST00000185017 106 ntBASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk5rap3Q99LM2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Gm8227-201ENSMUST00000223306 571 ntBASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Gm24526-201ENSMUST00000082921 158 ntBASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk5rap3Q99LM2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk5rap3Q99LM2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms