Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Gm19163-201ENSMUST00000223313 780 ntBASIC11.39□□□□□ -0.59
Lims1Q99JW4 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Gm9899-201ENSMUST00000065519 555 ntBASIC11.39□□□□□ -0.59
Lims1Q99JW4 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.39□□□□□ -0.59
Lims1Q99JW4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.39□□□□□ -0.59
Lims1Q99JW4 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Gm11814-201ENSMUST00000119515 929 ntBASIC11.38□□□□□ -0.59
Lims1Q99JW4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Gm12138-201ENSMUST00000122180 951 ntBASIC11.38□□□□□ -0.59
Lims1Q99JW4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Gm23119-201ENSMUST00000158610 140 ntBASIC11.38□□□□□ -0.59
Lims1Q99JW4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Gm4271-201ENSMUST00000174444 973 ntBASIC11.38□□□□□ -0.59
Lims1Q99JW4 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Gm8652-201ENSMUST00000181363 964 ntBASIC11.38□□□□□ -0.59
Lims1Q99JW4 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.38□□□□□ -0.59
Lims1Q99JW4 AC073947.1-201ENSMUST00000216991 649 ntBASIC11.38□□□□□ -0.59
Lims1Q99JW4 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Gm5356-201ENSMUST00000093326 615 ntBASIC11.38□□□□□ -0.59
Lims1Q99JW4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lims1Q99JW4 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lims1Q99JW4 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lims1Q99JW4 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lims1Q99JW4 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lims1Q99JW4 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lims1Q99JW4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lims1Q99JW4 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.37□□□□□ -0.59
Lims1Q99JW4 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lims1Q99JW4 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lims1Q99JW4 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lims1Q99JW4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lims1Q99JW4 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.37□□□□□ -0.59
Lims1Q99JW4 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lims1Q99JW4 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lims1Q99JW4 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lims1Q99JW4 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.37□□□□□ -0.59
Lims1Q99JW4 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.37□□□□□ -0.59
Lims1Q99JW4 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.37□□□□□ -0.59
Lims1Q99JW4 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.37□□□□□ -0.59
Lims1Q99JW4 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lims1Q99JW4 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lims1Q99JW4 Gm7029-201ENSMUST00000173226 450 ntBASIC11.37□□□□□ -0.59
Lims1Q99JW4 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lims1Q99JW4 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms