Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Clip1Q922J3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC19.44■□□□□ 0.7
Clip1Q922J3 Gm15432-201ENSMUST00000121106 195 ntBASIC19.44■□□□□ 0.7
Clip1Q922J3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC19.44■□□□□ 0.7
Clip1Q922J3 Gm4607-201ENSMUST00000206649 577 ntBASIC19.44■□□□□ 0.7
Clip1Q922J3 D9Wsu149-201ENSMUST00000214169 594 ntBASIC19.44■□□□□ 0.7
Clip1Q922J3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC19.44■□□□□ 0.7
Clip1Q922J3 Gm807-202ENSMUST00000224929 408 ntBASIC19.44■□□□□ 0.7
Clip1Q922J3 Gm1821-202ENSMUST00000227415 750 ntBASIC19.44■□□□□ 0.7
Clip1Q922J3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip1Q922J3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Clip1Q922J3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC19.43■□□□□ 0.7
Clip1Q922J3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip1Q922J3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC19.43■□□□□ 0.7
Clip1Q922J3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip1Q922J3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip1Q922J3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip1Q922J3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Clip1Q922J3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Clip1Q922J3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip1Q922J3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Clip1Q922J3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC19.43■□□□□ 0.7
Clip1Q922J3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip1Q922J3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clip1Q922J3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Clip1Q922J3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip1Q922J3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clip1Q922J3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip1Q922J3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Clip1Q922J3 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC19.43■□□□□ 0.7
Clip1Q922J3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC19.43■□□□□ 0.7
Clip1Q922J3 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Clip1Q922J3 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clip1Q922J3 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip1Q922J3 AC166992.1-201ENSMUST00000216356 565 ntBASIC19.43■□□□□ 0.7
Clip1Q922J3 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC19.43■□□□□ 0.7
Clip1Q922J3 AC154849.4-201ENSMUST00000224868 365 ntBASIC19.43■□□□□ 0.7
Clip1Q922J3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip1Q922J3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clip1Q922J3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Clip1Q922J3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC19.43■□□□□ 0.7
Clip1Q922J3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip1Q922J3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Clip1Q922J3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC19.42■□□□□ 0.7
Clip1Q922J3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Gm28323-201ENSMUST00000186817 2499 ntBASIC19.42■□□□□ 0.7
Clip1Q922J3 Gm13461-201ENSMUST00000120980 662 ntBASIC19.42■□□□□ 0.7
Clip1Q922J3 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Gm12164-201ENSMUST00000121695 551 ntBASIC19.42■□□□□ 0.7
Clip1Q922J3 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC19.42■□□□□ 0.7
Clip1Q922J3 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC19.42■□□□□ 0.7
Clip1Q922J3 Gm9826-201ENSMUST00000029124 1299 ntBASIC19.42■□□□□ 0.7
Clip1Q922J3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Clip1Q922J3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip1Q922J3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip1Q922J3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Clip1Q922J3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Clip1Q922J3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clip1Q922J3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip1Q922J3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC19.41■□□□□ 0.7
Clip1Q922J3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Clip1Q922J3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Clip1Q922J3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip1Q922J3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Clip1Q922J3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip1Q922J3 Gm18711-201ENSMUST00000199341 750 ntBASIC19.41■□□□□ 0.7
Clip1Q922J3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clip1Q922J3 Gm4157-201ENSMUST00000211647 679 ntBASIC19.41■□□□□ 0.7
Clip1Q922J3 AC169036.1-201ENSMUST00000227994 296 ntBASIC19.41■□□□□ 0.7
Clip1Q922J3 Ginm1-202ENSMUST00000065124 300 ntBASIC19.41■□□□□ 0.7
Clip1Q922J3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Clip1Q922J3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Clip1Q922J3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip1Q922J3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip1Q922J3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip1Q922J3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms