Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm21769-201ENSMUST00000211922 111 ntBASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Gm25214-201ENSMUST00000104573 129 ntBASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Gm2991-201ENSMUST00000173338 480 ntBASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Mir8109-201ENSMUST00000184375 117 ntBASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Gm42937-201ENSMUST00000197360 752 ntBASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Gm30285-201ENSMUST00000214614 422 ntBASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha9Q91Y11 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Gm44882-201ENSMUST00000205702 802 ntBASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdha9Q91Y11 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms