Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb2Q91Y00 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb2Q91Y00 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb2Q91Y00 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb2Q91Y00 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhb2Q91Y00 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb2Q91Y00 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb2Q91Y00 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb2Q91Y00 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb2Q91Y00 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb2Q91Y00 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb2Q91Y00 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb2Q91Y00 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhb2Q91Y00 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhb2Q91Y00 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb2Q91Y00 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb2Q91Y00 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb2Q91Y00 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb2Q91Y00 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Gm13875-201ENSMUST00000120162 282 ntBASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Gm15703-201ENSMUST00000120250 880 ntBASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Gm13350-201ENSMUST00000120519 479 ntBASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Gm27320-201ENSMUST00000184892 109 ntBASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb2Q91Y00 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Gm31256-201ENSMUST00000194705 506 ntBASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.28□□□□□ -0.28
Pcdhb2Q91Y00 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms