Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm10434-201ENSMUST00000101158 471 ntBASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Gm22018-201ENSMUST00000104357 131 ntBASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Gm13492-201ENSMUST00000119772 665 ntBASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Gm14704-201ENSMUST00000120300 874 ntBASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Gm11793-201ENSMUST00000120433 981 ntBASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Gm7809-201ENSMUST00000153199 742 ntBASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Gm43118-201ENSMUST00000199149 775 ntBASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Gm3961-201ENSMUST00000204425 994 ntBASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Gm6007-201ENSMUST00000208170 823 ntBASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga4Q91XY4 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhga4Q91XY4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.33□□□□□ -0.43
Pcdhga4Q91XY4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga4Q91XY4 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga4Q91XY4 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga4Q91XY4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.33□□□□□ -0.44
Pcdhga4Q91XY4 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga4Q91XY4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga4Q91XY4 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga4Q91XY4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga4Q91XY4 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga4Q91XY4 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga4Q91XY4 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga4Q91XY4 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga4Q91XY4 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga4Q91XY4 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.33□□□□□ -0.44
Pcdhga4Q91XY4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga4Q91XY4 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhga4Q91XY4 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms