Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.95□□□□□ -0.34
Usp3Q91W36 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp3Q91W36 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp3Q91W36 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp3Q91W36 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp3Q91W36 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Usp3Q91W36 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Usp3Q91W36 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp3Q91W36 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Usp3Q91W36 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Usp3Q91W36 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.94□□□□□ -0.34
Usp3Q91W36 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Gm14579-201ENSMUST00000117068 283 ntBASIC12.94□□□□□ -0.34
Usp3Q91W36 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.94□□□□□ -0.34
Usp3Q91W36 Gm14381-201ENSMUST00000122105 414 ntBASIC12.94□□□□□ -0.34
Usp3Q91W36 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Usp3Q91W36 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.94□□□□□ -0.34
Usp3Q91W36 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Usp3Q91W36 Gm27023-201ENSMUST00000182372 285 ntBASIC12.94□□□□□ -0.34
Usp3Q91W36 Gm37751-201ENSMUST00000192440 1198 ntBASIC12.94□□□□□ -0.34
Usp3Q91W36 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.94□□□□□ -0.34
Usp3Q91W36 Gm37002-201ENSMUST00000194560 373 ntBASIC12.94□□□□□ -0.34
Usp3Q91W36 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.94□□□□□ -0.34
Usp3Q91W36 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.94□□□□□ -0.34
Usp3Q91W36 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Gm39404-201ENSMUST00000216350 313 ntBASIC12.94□□□□□ -0.34
Usp3Q91W36 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.94□□□□□ -0.34
Usp3Q91W36 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.94□□□□□ -0.34
Usp3Q91W36 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Usp3Q91W36 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Usp3Q91W36 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Usp3Q91W36 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp3Q91W36 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Usp3Q91W36 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.93□□□□□ -0.34
Usp3Q91W36 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp3Q91W36 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Usp3Q91W36 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp3Q91W36 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Usp3Q91W36 Gm4732-201ENSMUST00000118778 473 ntBASIC12.93□□□□□ -0.34
Usp3Q91W36 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.93□□□□□ -0.34
Usp3Q91W36 Gm14999-201ENSMUST00000121039 624 ntBASIC12.93□□□□□ -0.34
Usp3Q91W36 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.93□□□□□ -0.34
Usp3Q91W36 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Gm29011-201ENSMUST00000191059 712 ntBASIC12.93□□□□□ -0.34
Usp3Q91W36 Gm31256-201ENSMUST00000194705 506 ntBASIC12.93□□□□□ -0.34
Usp3Q91W36 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.93□□□□□ -0.34
Usp3Q91W36 Gm10297-201ENSMUST00000207136 651 ntBASIC12.93□□□□□ -0.34
Usp3Q91W36 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Usp3Q91W36 Gm10076-201ENSMUST00000073238 384 ntBASIC12.93□□□□□ -0.34
Usp3Q91W36 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Usp3Q91W36 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Usp3Q91W36 AC136019.1-201ENSMUST00000226503 1412 ntBASIC12.93□□□□□ -0.34
Usp3Q91W36 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp3Q91W36 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms