Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
StrcQ8VIM6 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
StrcQ8VIM6 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.46□□□□□ -0.09
StrcQ8VIM6 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
StrcQ8VIM6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
StrcQ8VIM6 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
StrcQ8VIM6 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
StrcQ8VIM6 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
StrcQ8VIM6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
StrcQ8VIM6 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Gm22594-201ENSMUST00000104251 130 ntBASIC14.45□□□□□ -0.1
StrcQ8VIM6 Gm9673-201ENSMUST00000119287 781 ntBASIC14.45□□□□□ -0.1
StrcQ8VIM6 Gm14395-201ENSMUST00000120494 563 ntBASIC14.45□□□□□ -0.1
StrcQ8VIM6 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Gm37826-201ENSMUST00000195329 322 ntBASIC14.45□□□□□ -0.1
StrcQ8VIM6 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC14.45□□□□□ -0.1
StrcQ8VIM6 CT009527.1-201ENSMUST00000224205 339 ntBASIC14.45□□□□□ -0.1
StrcQ8VIM6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Gm10263-201ENSMUST00000085163 300 ntBASIC14.45□□□□□ -0.1
StrcQ8VIM6 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.45□□□□□ -0.1
StrcQ8VIM6 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC14.45□□□□□ -0.1
StrcQ8VIM6 Gm11502-201ENSMUST00000120917 1211 ntBASIC14.45□□□□□ -0.1
StrcQ8VIM6 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
StrcQ8VIM6 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Gm15374-201ENSMUST00000119313 844 ntBASIC14.44□□□□□ -0.1
StrcQ8VIM6 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC14.44□□□□□ -0.1
StrcQ8VIM6 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Gm24809-201ENSMUST00000175318 271 ntBASIC14.44□□□□□ -0.1
StrcQ8VIM6 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
StrcQ8VIM6 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC14.44□□□□□ -0.1
StrcQ8VIM6 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
StrcQ8VIM6 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Gm45199-201ENSMUST00000207640 1507 ntBASIC14.44□□□□□ -0.1
StrcQ8VIM6 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
StrcQ8VIM6 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
StrcQ8VIM6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
StrcQ8VIM6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
StrcQ8VIM6 Gm12194-201ENSMUST00000117756 1012 ntBASIC14.43□□□□□ -0.1
StrcQ8VIM6 Gm28833-201ENSMUST00000189671 559 ntBASIC14.43□□□□□ -0.1
StrcQ8VIM6 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC14.43□□□□□ -0.1
StrcQ8VIM6 AC158388.3-202ENSMUST00000225517 775 ntBASIC14.43□□□□□ -0.1
StrcQ8VIM6 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
StrcQ8VIM6 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
StrcQ8VIM6 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
StrcQ8VIM6 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.43□□□□□ -0.1
StrcQ8VIM6 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.43□□□□□ -0.1
StrcQ8VIM6 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.43□□□□□ -0.1
StrcQ8VIM6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
StrcQ8VIM6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
StrcQ8VIM6 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
StrcQ8VIM6 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms