Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Nup35Q8R4R6 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.16□□□□□ -0.78
Nup35Q8R4R6 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Gm24231-201ENSMUST00000104315 133 ntBASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Mir7654-201ENSMUST00000185082 70 ntBASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Nup35Q8R4R6 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nup35Q8R4R6 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nup35Q8R4R6 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Nup35Q8R4R6 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms