Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Gm8798-201ENSMUST00000211877 1661 ntBASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Gm15036-201ENSMUST00000118880 400 ntBASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Gm13263-201ENSMUST00000121271 838 ntBASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Gm3318-201ENSMUST00000217604 1183 ntBASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Gm7537-201ENSMUST00000221660 1414 ntBASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx54Q8K4L0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Gm13328-201ENSMUST00000120816 1020 ntBASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Gm11354-201ENSMUST00000121974 422 ntBASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Gm24398-201ENSMUST00000157870 109 ntBASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Gm9116-201ENSMUST00000192400 1018 ntBASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Gm44421-201ENSMUST00000205064 1221 ntBASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Gm45856-201ENSMUST00000212752 416 ntBASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 CT485606.1-201ENSMUST00000213187 878 ntBASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Gm7959-201ENSMUST00000221823 1078 ntBASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 AC165260.2-203ENSMUST00000224237 336 ntBASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 CT030653.1-201ENSMUST00000224382 1279 ntBASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 AC171277.1-201ENSMUST00000216902 1441 ntBASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC16.24■□□□□ 0.19
Ddx54Q8K4L0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Gm22920-201ENSMUST00000102175 109 ntBASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Gm14193-201ENSMUST00000105067 153 ntBASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Gm11836-201ENSMUST00000121022 441 ntBASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Gm15744-201ENSMUST00000161734 213 ntBASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms