Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Gm44405-201ENSMUST00000198952 126 ntBASIC11.79□□□□□ -0.52
Clrn1Q8K445 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.79□□□□□ -0.52
Clrn1Q8K445 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.79□□□□□ -0.52
Clrn1Q8K445 Gm45925-201ENSMUST00000218882 744 ntBASIC11.79□□□□□ -0.52
Clrn1Q8K445 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.79□□□□□ -0.52
Clrn1Q8K445 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn1Q8K445 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Gm24548-201ENSMUST00000158650 108 ntBASIC11.78□□□□□ -0.52
Clrn1Q8K445 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Gm17420-201ENSMUST00000164753 153 ntBASIC11.78□□□□□ -0.52
Clrn1Q8K445 Gm38002-201ENSMUST00000193255 180 ntBASIC11.78□□□□□ -0.52
Clrn1Q8K445 Gm43133-201ENSMUST00000197472 463 ntBASIC11.78□□□□□ -0.52
Clrn1Q8K445 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.78□□□□□ -0.52
Clrn1Q8K445 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.78□□□□□ -0.52
Clrn1Q8K445 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.78□□□□□ -0.52
Clrn1Q8K445 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.78□□□□□ -0.52
Clrn1Q8K445 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clrn1Q8K445 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clrn1Q8K445 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Clrn1Q8K445 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.77□□□□□ -0.52
Clrn1Q8K445 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Clrn1Q8K445 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Clrn1Q8K445 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clrn1Q8K445 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Clrn1Q8K445 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clrn1Q8K445 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clrn1Q8K445 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.52
Clrn1Q8K445 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clrn1Q8K445 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clrn1Q8K445 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.77□□□□□ -0.53
Clrn1Q8K445 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Gm8018-201ENSMUST00000173536 789 ntBASIC11.77□□□□□ -0.53
Clrn1Q8K445 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Gm45930-201ENSMUST00000221330 292 ntBASIC11.77□□□□□ -0.53
Clrn1Q8K445 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Clrn1Q8K445 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms