Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.6□□□□□ -0.39
Clip4Q8CI96 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Gm19184-201ENSMUST00000196798 928 ntBASIC12.6□□□□□ -0.39
Clip4Q8CI96 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Gm4768-201ENSMUST00000206199 686 ntBASIC12.6□□□□□ -0.39
Clip4Q8CI96 Gm19163-201ENSMUST00000223313 780 ntBASIC12.6□□□□□ -0.39
Clip4Q8CI96 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.6□□□□□ -0.39
Clip4Q8CI96 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Gm27572-201ENSMUST00000183702 255 ntBASIC12.59□□□□□ -0.39
Clip4Q8CI96 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Gm37008-201ENSMUST00000195712 319 ntBASIC12.59□□□□□ -0.39
Clip4Q8CI96 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Clip4Q8CI96 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Clip4Q8CI96 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clip4Q8CI96 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Clip4Q8CI96 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Clip4Q8CI96 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.58□□□□□ -0.4
Clip4Q8CI96 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Gm25261-201ENSMUST00000157416 134 ntBASIC12.58□□□□□ -0.4
Clip4Q8CI96 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.58□□□□□ -0.4
Clip4Q8CI96 Gm37042-201ENSMUST00000193816 581 ntBASIC12.58□□□□□ -0.4
Clip4Q8CI96 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.58□□□□□ -0.4
Clip4Q8CI96 Gm19309-201ENSMUST00000218295 205 ntBASIC12.58□□□□□ -0.4
Clip4Q8CI96 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.58□□□□□ -0.4
Clip4Q8CI96 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms