Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lrif1Q8CDD9 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Gm13689-201ENSMUST00000119360 685 ntBASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lrif1Q8CDD9 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Gm13612-201ENSMUST00000119276 390 ntBASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Gm38671-201ENSMUST00000200573 130 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms