Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Uba3Q8C878 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Uba3Q8C878 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Uba3Q8C878 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Uba3Q8C878 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Uba3Q8C878 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Uba3Q8C878 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.15□□□□□ -0.3
Uba3Q8C878 Gm14999-201ENSMUST00000121039 624 ntBASIC13.15□□□□□ -0.3
Uba3Q8C878 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Uba3Q8C878 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.15□□□□□ -0.3
Uba3Q8C878 Gm27243-201ENSMUST00000183964 521 ntBASIC13.15□□□□□ -0.3
Uba3Q8C878 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.15□□□□□ -0.3
Uba3Q8C878 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.15□□□□□ -0.3
Uba3Q8C878 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.15□□□□□ -0.3
Uba3Q8C878 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.15□□□□□ -0.3
Uba3Q8C878 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Uba3Q8C878 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba3Q8C878 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Uba3Q8C878 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Uba3Q8C878 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Uba3Q8C878 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.14□□□□□ -0.31
Uba3Q8C878 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba3Q8C878 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba3Q8C878 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.14□□□□□ -0.31
Uba3Q8C878 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Uba3Q8C878 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba3Q8C878 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba3Q8C878 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba3Q8C878 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Uba3Q8C878 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba3Q8C878 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.14□□□□□ -0.31
Uba3Q8C878 Gm25043-201ENSMUST00000158604 212 ntBASIC13.14□□□□□ -0.31
Uba3Q8C878 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Uba3Q8C878 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Uba3Q8C878 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Uba3Q8C878 Gm18304-201ENSMUST00000189162 546 ntBASIC13.14□□□□□ -0.31
Uba3Q8C878 Gm6007-201ENSMUST00000208170 823 ntBASIC13.14□□□□□ -0.31
Uba3Q8C878 Gm45865-201ENSMUST00000211815 945 ntBASIC13.14□□□□□ -0.31
Uba3Q8C878 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.14□□□□□ -0.31
Uba3Q8C878 Cts7-204ENSMUST00000225321 1257 ntBASIC13.14□□□□□ -0.31
Uba3Q8C878 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba3Q8C878 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Uba3Q8C878 Gm10076-201ENSMUST00000073238 384 ntBASIC13.14□□□□□ -0.31
Uba3Q8C878 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba3Q8C878 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba3Q8C878 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.14□□□□□ -0.31
Uba3Q8C878 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.14□□□□□ -0.31
Uba3Q8C878 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba3Q8C878 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Uba3Q8C878 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Uba3Q8C878 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.13□□□□□ -0.31
Uba3Q8C878 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Uba3Q8C878 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Uba3Q8C878 Gm25214-201ENSMUST00000104573 129 ntBASIC13.13□□□□□ -0.31
Uba3Q8C878 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Uba3Q8C878 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.13□□□□□ -0.31
Uba3Q8C878 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Uba3Q8C878 Gm38266-201ENSMUST00000194931 421 ntBASIC13.13□□□□□ -0.31
Uba3Q8C878 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Uba3Q8C878 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.13□□□□□ -0.31
Uba3Q8C878 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.13□□□□□ -0.31
Uba3Q8C878 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms