Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tsen54Q8C2A2 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Mir6392-201ENSMUST00000184924 108 ntBASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Gm18624-201ENSMUST00000220966 658 ntBASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tsen54Q8C2A2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Gm43094-201ENSMUST00000196549 921 ntBASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Gm18018-201ENSMUST00000198273 408 ntBASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Gm45668-201ENSMUST00000211271 493 ntBASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Gm8227-201ENSMUST00000223306 571 ntBASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tsen54Q8C2A2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Tsen54Q8C2A2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms