Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim47Q8C0E3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm24830-201ENSMUST00000102024 166 ntBASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm25890-201ENSMUST00000177643 165 ntBASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm22614-201ENSMUST00000178300 165 ntBASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 AA914427-201ENSMUST00000193194 1166 ntBASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm22042-201ENSMUST00000082989 165 ntBASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm26232-201ENSMUST00000083360 166 ntBASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm24136-201ENSMUST00000083374 165 ntBASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm26110-201ENSMUST00000083971 165 ntBASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim47Q8C0E3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Gm14109-201ENSMUST00000118814 309 ntBASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Gm14913-201ENSMUST00000120011 1093 ntBASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Gm13263-201ENSMUST00000121271 838 ntBASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Gm27046-201ENSMUST00000182160 463 ntBASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Gm38317-201ENSMUST00000195564 343 ntBASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Gm18056-201ENSMUST00000207670 568 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms