Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trub1Q8C0D0 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Gm6023-201ENSMUST00000118217 606 ntBASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Gm9083-201ENSMUST00000120423 819 ntBASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Gm27390-201ENSMUST00000184516 176 ntBASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Gm37424-201ENSMUST00000191727 561 ntBASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Gm43133-201ENSMUST00000197472 463 ntBASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Gm18062-201ENSMUST00000208020 547 ntBASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Gm18055-201ENSMUST00000208254 547 ntBASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Gm19309-201ENSMUST00000218295 205 ntBASIC12.86□□□□□ -0.35
Trub1Q8C0D0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trub1Q8C0D0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Gm13875-201ENSMUST00000120162 282 ntBASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Gm38002-201ENSMUST00000193255 180 ntBASIC12.85□□□□□ -0.35
Trub1Q8C0D0 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Gm10076-201ENSMUST00000073238 384 ntBASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trub1Q8C0D0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms