Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Gm11591-201ENSMUST00000120063 702 ntBASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Mir1938-201ENSMUST00000158746 100 ntBASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Gm17208-201ENSMUST00000168388 535 ntBASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Gm38002-201ENSMUST00000193255 180 ntBASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Gm37042-201ENSMUST00000193816 581 ntBASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cpsf4Q8BQZ5 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Snord83b-201ENSMUST00000104546 94 ntBASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Gm4768-201ENSMUST00000206199 686 ntBASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Gm6007-201ENSMUST00000208170 823 ntBASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Gm32025-201ENSMUST00000217960 307 ntBASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms